Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900355.1_cds_XP_016450421.1_44875
CDS Infomation

[gene=LOC107775223] [db_xref=GeneID:107775223] [protein=protein EFFECTOR OF TRANSCRIPTION 2-like isoform X2] [protein_id=XP_016450421.1] [location=complement(join(15173..16375,16808..17179,18230..18256))] [gbkey=CDS]
Sequence

ATGTCATTCATCCATAAAGGAGAAAAGATTCTAATTGGGCCTAATGATTGGACGAATTAT
TTACTGGGGAAGGAAGGAGCAGAGAAATATAGGACTCAGAACCTGCCAAACTGCACCTCG
TGCTCTGGAGTTTATGAGCTTGGAATAGCTGTGTCACGACACCAAGCTGGGCGAGAGGCT
AGCAGACTTGACCCTGATTATATTGTTCCTGTATATGTTGGAAAATCTGACATTGTTAGG
ACTAGGCTACAGCGGTATGGCCGTGAAGGCGCTCATTTAGAGAATATCTGCTCCAATAGT
GCACTGCACGACCAAGAAAATGTATCTGCTTCAAAGAGAGCAGGATTGTTTACAGAAGCA
TTCTCAAGAGGCTTCTCTATCGTTTATAGGTGGGCACCTATGAATGACAACAAAGATGCT
GAGAAAACTGAATCCCAGCTGCTCGACAGATTTGACTATGCTTGGAATAAAGGCAGTAAT
GGCGTACGTCGACACAATGATGTCCTCCACAAACTTGATCGCATTTCAAGAGCAACTCGT
CTTCCTGCTTTTGTCAGGAAGCTTCAATTGTCCCTTGAGAAACAAAAAGGTGTCAAAATC
AAAGCTTGCAAGCCCCTTTTGTTGGAGAACGGATCTGAGTTTCATGATAGCTTCAAAGGC
ACTTATTTCCTTCCCCAAATCTTCAAATTTGGTCGATCAAACCCAAGAATAATTTCACTA
AGTTCCGGTGTAAATGGTGATCCAAATACTATCTGTGGTGTGGCTTTGGGTCATGGATCT
GTTTGTATAAGGCCTCCAATTATGGGAAATAAAAGATGTGCTGAGCACAAGGGAATGAAG
GTAAATGGTGTAAATTCAAAGTTGATTGCAGAATGTTTGGAGCACAAGGGAAGGAGTCGA
GGCTTAATTTCTCAGCCAGTGACAGACAAAAGTTGCCACTGGACCCACAATCCTATACTT
GAAAACAGGACTTATTCCACTGATGATGGCCAGCAGATGTTATCCCGTACAGCTGATACA
CAACACCCTCAAGATTTCTCTAGCTGTCCTCTTATCGGCAAGAACCACAAGGTCATGTGT
GGAGTTCACTTAAATGATGGTAGTTTTTGCACCAGGCAACCTGCAGTAGGAAGAAAGCGG
TGTGAAGAACATAAGGGTATGAGGGTTAAAGAGCCCATTTCTAAGCAATTAGGAGTAGAA
ATACCGAGTGTATTTGCAGGTCCAGCTACCAAAATTAGCAGTGAGAAAATGCATTGGAAT
ATAGACATTCCATCAGTCAACCATTCTCCGGCTTGTGGAGCAACATTGTGTAATGGTTCC
TTTTGCAGAAGGAAACCTTCGGAAGGTAATAAAAGATGTTGGCAGCACAAAGGTATGAGG
GTTAAAGAGCCCATTTCTAAGCAATTAGAAGCAGAAATACCAAGTGTATTTGCAGGTCCA
GCTACCAAAATTAGCAGTGAGAAAATGCATTGGAATATAGACATTCCATCAGTCAACCAT
TCTCCAGCTTGTGGAGCAACATTGCGTAATGGTTCCTTTTGCAGAAGGAAACCTTCGAAA
GGTAATAAAAGATGTTGGCAGCACAAAGGCATGAAGAGTTGA

Peptide Sequence

PEP ID

XP_016450421.1
PEP Infomation

PREDICTED: protein EFFECTOR OF TRANSCRIPTION 2-like isoform X2 [Nicotiana tabacum]
Sequence

MSFIHKGEKILIGPNDWTNYLLGKEGAEKYRTQNLPNCTSCSGVYELGIAVSRHQAGREA
SRLDPDYIVPVYVGKSDIVRTRLQRYGREGAHLENICSNSALHDQENVSASKRAGLFTEA
FSRGFSIVYRWAPMNDNKDAEKTESQLLDRFDYAWNKGSNGVRRHNDVLHKLDRISRATR
LPAFVRKLQLSLEKQKGVKIKACKPLLLENGSEFHDSFKGTYFLPQIFKFGRSNPRIISL
SSGVNGDPNTICGVALGHGSVCIRPPIMGNKRCAEHKGMKVNGVNSKLIAECLEHKGRSR
GLISQPVTDKSCHWTHNPILENRTYSTDDGQQMLSRTADTQHPQDFSSCPLIGKNHKVMC
GVHLNDGSFCTRQPAVGRKRCEEHKGMRVKEPISKQLGVEIPSVFAGPATKISSEKMHWN
IDIPSVNHSPACGATLCNGSFCRRKPSEGNKRCWQHKGMRVKEPISKQLEAEIPSVFAGP
ATKISSEKMHWNIDIPSVNHSPACGATLRNGSFCRRKPSKGNKRCWQHKGMKS

Transcript Sequence

Gene sequence data has not been registered.